DeepChem Server Logo

Getting Started

  • Prerequisites
  • Installation
    • Docker Installation (Recommended)
      • Prerequisites
      • Steps
      • Available Dockerfiles
    • Manual Installation
      • Prerequisites
      • Steps
    • Configuration
    • Verification
      • Getting Help
  • Quick Start
    • Before You Begin
    • Interactive API Documentation
    • Basic Workflow
    • Available Endpoints
    • Python Client Library
    • Troubleshooting
  • Next Steps

Backend Server

  • Overview
  • REST API
    • Base URL
    • Interactive Documentation
    • Router Module Documentation
    • Response Formats
    • Error Handling
    • FastAPI Configuration
    • Best Practices
  • Core Modules
    • Datastore Operations
    • Address Management
      • DeepchemAddress
    • Cards and Metadata
      • Card
      • DataCard
      • ModelCard
    • Configuration
      • set_datastore()
      • get_datastore()
      • refresh()
    • Progress Logger
      • log_progress()
    • Model Mappings
      • sklearn_model()
      • update_logs()
    • Model Config Mapping
      • DeepChemModelConfigMapper
      • ModelAddressWrapper
    • Compute Operations
  • Utilities
    • Utility Functions
    • Summary

Core Primitives

  • Overview
  • Featurization
    • Supporting Functions
    • Available Featurizers
  • Training
    • train()
    • Available Models
  • Inference
    • infer()
    • Supporting Functions
      • _infer_with_featurize()
      • _infer_without_featurize()
  • Evaluation
    • model_evaluator()
    • Supporting Functions
      • prc_auc_curve()
  • Molecular Docking
    • generate_pose()
    • Supporting Functions
    • Available Metrics
  • Workflow Integration
    • Example Workflow

PyDS Library

  • Getting Started
    • Installation
    • Architecture
    • Quick Start
  • Core Modules
    • Settings Class
    • BaseClient Class
    • Data Class
  • Primitives
    • Primitive Base Class
    • Featurize Primitive
    • Train Primitive
    • Evaluate Primitive
    • Infer Primitive
    • TVTSplit Primitive
  • Configuration
    • Settings File Format
    • Configuration Methods
    • Error Handling
    • Integration with DeepChem Server
DeepChem Server
  • Overview: module code

All modules for which code is available

  • deepchem_server.core.address
  • deepchem_server.core.cards
  • deepchem_server.core.config
  • deepchem_server.core.docking
  • deepchem_server.core.evaluator
  • deepchem_server.core.feat
  • deepchem_server.core.inference
  • deepchem_server.core.model_config_mapper
  • deepchem_server.core.model_mappings
  • deepchem_server.core.progress_logger
  • deepchem_server.core.train

© Copyright 2025, Deep Forest Sciences.

Built with Sphinx using a theme provided by Read the Docs.